Topic: sars-cov-2 Goto Github
Some thing interesting about sars-cov-2
Some thing interesting about sars-cov-2
sars-cov-2,Ultra-deep search for novel viruses
User: ababaian
Home Page: http://serratus.io
sars-cov-2,A simple, decentralized. privacy-reserving contact tracing system
Organization: ailabstw
Home Page: https://covirus.cc/social-distancing-app-intro.html
sars-cov-2,An open-source CO2 monitor helping to ensure a healthy environment in a class room and slowing down the spread of the corona SARS-CoV-2 virus.
User: alfkoehn
Home Page: https://github.com/alfkoehn/CO2_monitor
sars-cov-2,The Public Health Environmental Surveillance Open Data Model (PHES-ODM, or ODM). A data model, dictionary and support tools for environmental surveillance.
Organization: big-life-lab
sars-cov-2,The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration
Organization: bluebrain
Home Page: https://portal.bluebrain.epfl.ch/resources/software/exploration/
sars-cov-2,COVID-19 interactive dashboard for the whole world
User: boogheta
Home Page: https://boogheta.github.io/coronavirus-countries/
sars-cov-2,Pyro models of SARS-CoV-2 variants
Organization: broadinstitute
sars-cov-2,V-pipe is a pipeline designed for analysing NGS data of short viral genomes
Organization: cbg-ethz
Home Page: https://cbg-ethz.github.io/V-pipe/
sars-cov-2,Benchmark datasets for WGS analysis of SARS-CoV-2. (https://peerj.com/articles/13821/)
Organization: cdcgov
sars-cov-2,Automated Data Collection: COVID-19/SARS-COV-2 Cases in EU by Country, State/Province/Local Authorities, and Date
Organization: covid19-eu-zh
sars-cov-2,Mobile application of Covid19 Cuba Data project implemented with Flutter
Organization: covid19cuba
Home Page: https://covid19cubadata.github.io
sars-cov-2,Unified COVID-19 Dataset
User: cssegisanddata
sars-cov-2,Folding@home COVID-19 efforts
Organization: foldingathome
Home Page: https://foldingathome.org
sars-cov-2,A web platform to detect and analyze variants of SARS-CoV-2
Organization: genspectrum
Home Page: https://cov-spectrum.org
sars-cov-2,A collaborative review of the emerging COVID-19 literature. Join the chat here:
Organization: greenelab
Home Page: https://gitter.im/covid19-review/community
sars-cov-2,query stats of infected coronavirus cases
User: guangchuangyu
Home Page: https://guangchuangyu.github.io/nCov2019/
sars-cov-2,COVID-Net Open Source Initiative - Models and Data for COVID-19 Detection in Chest CT
User: haydengunraj
Home Page: https://alexswong.github.io/COVID-Net/
sars-cov-2,Data collection to analyze the dissemination of COVID-19 through Brazilian states. Contributions are welcome.
User: henriquemor
sars-cov-2,Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
Organization: hodcroftlab
Home Page: https://covariants.org/
sars-cov-2,🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.
Organization: immunomind
sars-cov-2,Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS
User: je-suis-tm
Home Page: https://je-suis-tm.github.io/graph-theory
sars-cov-2,COVID-19 Detection Chest X-rays and CT scans: COVID-19 Detection based on Chest X-rays and CT Scans using four Transfer Learning algorithms: VGG16, ResNet50, InceptionV3, Xception. The models were trained for 500 epochs on around 1000 Chest X-rays and around 750 CT Scan images on Google Colab GPU. A Flask App was later developed wherein user can upload Chest X-rays or CT Scans and get the output of possibility of COVID infection.
User: kaushikjadhav01
sars-cov-2,SARS-Cov-2 Recombinant Finder for fasta sequences
User: lenaschimmel
sars-cov-2,COVID-Net Open Source Initiative
User: lindawangg
sars-cov-2,🫁 The world's first open-source ventilator tested on human patients. Mass-producible at a low cost (~2000€).
Organization: makers-for-life
sars-cov-2,Models of COVID-19 outbreak trajectories and hospital demand
Organization: neherlab
Home Page: https://covid19-scenarios.org
sars-cov-2,Informal summaries of notable SARS-CoV-2 lineages
Organization: neherlab
sars-cov-2,Nextstrain build for novel coronavirus SARS-CoV-2
Organization: nextstrain
Home Page: https://nextstrain.org/ncov
sars-cov-2,Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
Organization: nextstrain
Home Page: https://clades.nextstrain.org
sars-cov-2,Assembly and intrahost/low-frequency variant calling for viral samples
Organization: nf-core
Home Page: https://nf-co.re/viralrecon
sars-cov-2,An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.
Organization: opengene
sars-cov-2,Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data
Organization: owid
Home Page: https://ourworldindata.org/coronavirus
sars-cov-2,Evidence SARS-CoV-2 Emerged From a Biological Laboratory in Wuhan, China
User: project-evidence
Home Page: https://project-evidence.github.io
sars-cov-2,PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross
User: rajeshrinet
Home Page: https://pyross.readthedocs.io
sars-cov-2,As a part of COVID-19 Host Genetics Initiative, we perform the following set of analyses to better understand the genetic basis of COVID-19 susceptibility and severity.
Organization: rivas-lab
sars-cov-2,Im Datensatz 'COVID-19-Hospitalisierungen' werden die aktuellen Zahlen der nach den Vorgaben des Infektionsschutzgesetzes - IfSG - erfassten hospitalisierten COVID-19-Fälle bereitgestellt.
Organization: robert-koch-institut
Home Page: https://robert-koch-institut.github.io/COVID-19-Hospitalisierungen_in_Deutschland/
sars-cov-2,Die COVID-19-Impfung kann einen Wendepunkt in der Kontrolle der COVID-19-Pandemie darstellen und erfährt daher hohes Maß an öffentlicher Aufmerksamkeit. Einführung und Umsetzung der COVID-19-Impfung gehen mit besonderen Herausforderungen einher, die bei der Impfdatenerfassung zu berücksichtigen sind. In diesem Kontext ist es Ziel des Projekts 'D...
Organization: robert-koch-institut
Home Page: https://robert-koch-institut.github.io/COVID-19-Impfungen_in_Deutschland/
sars-cov-2,Der vorliegende Datansatz enthält umfassende Informationen zu SARS-CoV-2-Infektionen in Deutschland, die gemäß dem Infektionsschutzgesetze (IfSG) von den Gesundheitsämtern an das Robert Koch-Institut (RKI) gemeldet wurden. Die Daten umfassen Informationen zur Anzahl der bestätigten Fälle, Todesfälle und Genesungen.
Organization: robert-koch-institut
Home Page: https://doi.org/10.5281/zenodo.4681153
sars-cov-2,Das Nowcasting erstellt eine Schätzung des Verlaufs der Anzahl von bereits erfolgten SARS-CoV-2-Erkrankungsfällen in Deutschland unter Berücksichtigung des Diagnose-, Melde- und Übermittlungsverzugs.
Organization: robert-koch-institut
Home Page: https://doi.org/10.5281/zenodo.4680400
sars-cov-2,Ein zentraler Bestandteil einer erfolgreichen Erregersurveillance ist das Verständnis der Verbreitung eines Erregers sowie seiner pathogenen Eigenschaften. Hierbei stellt das Wissen über das Erregergenom eine wichtige Informationsquelle dar. So erlaubt der Nachweis von Mutationen im Genom eines Erregers, Verwandtschaftsbeziehungen zu rekonstruie...
Organization: robert-koch-institut
Home Page: https://robert-koch-institut.github.io/SARS-CoV-2-Sequenzdaten_aus_Deutschland/
sars-cov-2,Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
User: ryansmcgee
sars-cov-2,Repository to propose and discuss lineages
Organization: sars-cov-2-variants
sars-cov-2,🦠 Huge collection of useful projects and resources for COVID-19 (2019 novel Coronavirus)
User: soroushchehresa
Home Page: https://corona.js.org
sars-cov-2,Reference-based consensus creation
Organization: uphl-biongs
sars-cov-2,A repository for sharing information on available COVID-19 RNA-Seq datasets
User: urmi-21
sars-cov-2,A global collection of Open Source projects during COVID-19
User: weileizeng
Home Page: http://open-source-covid-19.weileizeng.com/
sars-cov-2,Programmatically interact with the GISAID database.
User: wytamma
sars-cov-2,Ultrafast Sample Placement on Existing Trees
User: yatisht
sars-cov-2,COVID-19 infectious forecasting using SEIR model and R0 estimation
User: yijunwang0805
sars-cov-2,Malaysia COVID-19 dataset by country, states and clusters (Archived)
User: ynshung
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