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biopython-cn's Issues

Table format errors

Table format in chapters 11, 14 and 16 may have errors. The github cannot render the whole files.

是否考虑更新?

当前英文文档“Last Update – 21 June 2018 (Biopython 1.72)”,应该有不少更新,是否考虑更新中文版本?

在biopython嵌套循环是计算次数不对

当我使用嵌套循环的时候,计算次数少于应该计算的次数
这是第一个文件的序列数目。共有五个
image
这是第一个文件的序列数目。共有三个
image
这是嵌套计算的次数,理论上应该计算15次,但是只计算了三次
image
请问这个问题怎么解决,谢谢!!

equation format errors

Equations in chapters 12, 15, 16 and 18 need to be fixed. It seems pandoc translated those equations in latex into tables.

How to import HSExposure?

How to import HSExposure?

model = structure[0]
hse = HSExposure()

Calculate HSEalpha

exp_ca = hse.calc_hs_exposure(model, option='CA3')

Calculate HSEbeta

exp_cb=hse.calc_hs_exposure(model, option='CB')

Calculate classical coordination number

exp_fs = hse.calc_fs_exposure(model)

Print HSEalpha for a residue

print exp_ca[some_residue]

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