Topic: cryo-em Goto Github
Some thing interesting about cryo-em
Some thing interesting about cryo-em
cryo-em,Image-processing software for cryo-electron microscopy
Organization: 3dem
Home Page: https://relion.readthedocs.io/en/latest/
cryo-em,deep structural disentanglement
User: alncat
cryo-em,Implementation of a Bayesian approach to cryo-EM structure determination
User: arunabh98
cryo-em,Conventions for 3DEM software packages
User: azazellochg
cryo-em,Fetch metadata from EPU / SerialEM and launch on-the-fly pre-processing
User: azazellochg
cryo-em,Leveraging Structural Prior and Constraints for Cryo-EM Heterogeneous Reconstruction
Organization: bytedance
Home Page: https://bytedance.github.io/cryostar/
cryo-em,Computational Crystallography Toolbox
Organization: cctbx
Home Page: https://cci.lbl.gov/docs/cctbx
cryo-em,Software to integrate Relion GUI with Amazon Web Services, accompanied by easy command line tools. Learn more at cryoem-tools.cloud
Organization: cianfrocco-lab
cryo-em,Pre-revolution cryo-EM scripts
Organization: cianfrocco-lab
cryo-em,Python library that enables scripting access to CryoSPARC, a cryo-EM software package.
Organization: cryoem-uoft
Home Page: https://tools.cryosparc.com
cryo-em,CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The cryoSPARC platform enables automated, high quality and high-throughput structure discovery of proteins, viruses and molecular complexes for research and drug discovery.
Organization: cryoem-uoft
Home Page: https://cryosparc.com/docs/reference/install/
cryo-em,[BS]物联网工程,[MS]计算机技术,python,mooc资源,机器学习,深度学习,cryo-em[冷冻电子显微镜],3D reconstruction[三维重建],Computational Vison。
User: cswangchen
cryo-em,example set up for Relion on AWS ParallelCluster for CryoEM
User: daisukemiyamoto
cryo-em,A CNN for denoising cryo-EM images
User: eugenepalovcak
cryo-em,Simulation of cryo-EM ensemble data from atomic models of molecules exhibiting continuous motions
User: evanseitz
cryo-em,Software implementation for paper Heuristic Analysis of Manifolds from Simulated Cryo-EM Ensemble Data
User: evanseitz
cryo-em,ManifoldEM Python suite
User: evanseitz
cryo-em,ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.
User: frangakislab
Home Page: https://frangakis.biophysik.org/
cryo-em,Plot the 2D histogram of Euler angles covered by a set of cryo-EM particles
User: guillawme
Home Page: https://pypi.org/project/angdist
cryo-em,Utilities to help cryoEM data analysis
User: guillawme
cryo-em,Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
Organization: haddocking
cryo-em,Scripts and sources of the block-based reconstruction/refinement in cryo-EM
User: homurachan
cryo-em,Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)
Organization: i2pc
Home Page: http://scipion.i2pc.es
cryo-em,Self-supervised learning for isotropic cryoET reconstruction
Organization: isonet-cryoet
cryo-em,Overcoming the preferred orientation problem in cryoEM with self-supervised deep-learning
Organization: isonet-cryoet
Home Page: https://www.biorxiv.org/content/10.1101/2024.04.11.588921v1
cryo-em,Learning to recover orientations from projections in single-particle cryo-EM
User: jelenabanjac
Home Page: https://jelenabanjac.com/protein-reconstruction/index.html
cryo-em,register 3D point clouds using rotation, translation, and scale transformations.
User: jewettaij
Home Page: https://jensenlab.caltech.edu/
cryo-em,A CTF Simulation Web App
Organization: jianglab
Home Page: https://jiang.bio.purdue.edu/ctfsimulation
cryo-em,CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.
Organization: kiharalab
Home Page: https://em.kiharalab.org/algorithm/CryoREAD
cryo-em,DAQ: Residue-Wise Local Quality Estimation for Protein Models from Cryo-EM Maps
Organization: kiharalab
Home Page: https://em.kiharalab.org/algorithm/daqscore
cryo-em,DeepMainmast
Organization: kiharalab
Home Page: https://em.kiharalab.org/algorithm/DeepMainMast
cryo-em,DiffModeler: a diffusion model based protein complex structure modeling tool.
Organization: kiharalab
Home Page: https://em.kiharalab.org/algorithm/DiffModeler
cryo-em,Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning
Organization: kiharalab
Home Page: https://em.kiharalab.org/algorithm/emap2sec+
cryo-em,TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram averaging.
Organization: kudryashevlab
Home Page: https://github.com/KudryashevLab/TomoBEAR/wiki
cryo-em,A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
User: kuixu
cryo-em,High Throughput Electron Microscopy Image Processing Software
Organization: lbem-ch
Home Page: http://www.focus-em.org
cryo-em,cryo-ET particle picking using triplet networks and metric learning
Organization: mpi-dortmund
cryo-em,Transphire: Cryo-EM on the fly processing pipeline
Organization: mpi-dortmund
Home Page: http://sphire.mpg.de/
cryo-em,Web-interface for nextPYP
Organization: nextpyp
Home Page: https://nextpyp.app/
cryo-em,Cryo-EM/ET image analysis
Organization: nextpyp
Home Page: https://nextpyp.app/
cryo-em,A curated list of awesome computational cryo-EM methods.
User: phonchi
cryo-em,Covariance Estimation and Denoising for Cryo-EM Images (Covariance Wiener Filtering)
Organization: princetonuniversity
cryo-em,Deep learning for cryo-EM maps post-processing
User: rsanchezgarc
cryo-em,Manipulate and mine Relion .star files
User: sami-chaaban
cryo-em,Official Pytorch Implementation of Residual Multiplicative Filter Networks
User: shekshaa
cryo-em,Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
User: tbepler
cryo-em,pytorch implementation of noise2noise for Cryo-EM image denoising
User: zhenyutan
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