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viral-ngs-deploy

Deployment files related to https://github.com/broadinstitute/viral-ngs

viral-ngs-staging

CI staging area between github.com/broadinstitute/viral-pipelines and Dockstore (via Travis)

viral-phylo

viral-ngs: phylogenetics, annotation, intrahost variants

viral-pipelines

viral-ngs: complete pipelines

viral-rmd

Rmarkdown base image for viral genomics

viral-workshops

Documentation for viral analysis workshops

vlad

LD for variants

warp

WDL Analysis Research Pipelines

warp-tools

This repository contains all containers that WARP uses.

wdl

Workflow Description Language - Specification and Implementations

wdl-for-dockstore

wdl-ide

Rich IDE support for Workflow Description Language

wdl-pipseeker

wdl wrapper for pipseeker

wdl-runner

Easily run WDL workflows on GCP

wdl-sublime-syntax-highlighter

wdl-syntax-highlighting

Syntax Highlighting for WDL files

wdl4s

Scala bindings for WDL

wdltool

wes2cromwell

Shim accepting WES REST requests and translating to/from Cromwell REST requests

wfl

WorkFlow Launcher (née Zero)

widdler

A command-line tool for executing, managing, and querying WDL workflows on Cromwell servers.

winstanley

An IntelliJ Plug-in for WDL

woodard

A Scala client for the Cromwell server

wordpress-crowd-plugin

Crowd Authentication Plugin for Wordpress

workbench-libs

Workbench utility libraries

workbench-tos

APIs - currently implemented as a Cloud Function - for users' responses to Terms of Service.

workflow-dispatch

A GitHub Action for triggering workflows, using the `workflow_dispatch` event

workflow-visualizer

This is a future add on to job manager once the job manager codebase is rewritten in React.

workingdogs

wot

A software package for analyzing snapshots of developmental processes